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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922685.1_cds_XP_016471451.1_63791
CDS Infomation

[gene=LOC107793584] [db_xref=GeneID:107793584] [protein=probable prolyl 4-hydroxylase 12 isoform X2] [protein_id=XP_016471451.1] [location=join(70650..70720,71236..71343,71580..71637,71732..71821,72225..72282,72405..72577,72669..73019)] [gbkey=CDS]
Sequence

ATGGCGAGCTTTCTTTGGGTTTTTATCTTCTTGGCTTTGGGGATCAATTCCCAGCTTCTT
TTCGCCCAAAACCGAAAAGAATTGAGGGGCAAGGAGGTAAATGGGGATGACATTGTAAAG
TTGGGCCATTCAAATAGATTTGATCCCTCACAAGTCGTTCAGCTCTCGTGGCGACCAAGG
GTCTTCTTGTATAGAGACTTTCTCTCAGCAGAAGAGACTGATCACTTAATCTCCTTGGTG
CATGGCAAGAGAAATAGCTCCACAAGCGATAACGCTTCATTGGATGCAGAGAAGTTCCCA
ACCATGGGTATTCCCTTAGATGCGGAGGATCCTACTTCCTCAAGGATTGAAGAAAGGATC
TCGGCTTGGACCTTTCTGCCTAAAGGAAACAGCAGGCCGTTGCATGTTCAGCGTTCTGGG
CGTGAGAATTTAAAGGGGAATTATGGTTATTTTGACGGGAACTCCGCACTTAAATCCAAA
GAACCATTAATGGCAACTGTCATTTTGTACCTATCAAATGTGACGCAAGGTGGTCAGATC
CTCTTCCCTGAGTCGAAGAATAAGATTTTCTCCGACTGTATGAAGAGTAGTGACACCTTG
AAACCAACGAAAGGAAATGCAATCCTGTTCTTCAATGCCCACCTTGATGCATCTCCTGAC
AGGAGGAGTTCCCATGCAAGATGCCCTGTTATTGAGGGTGAAATGTGGTATGCAATCAAA
TTCTTTTATCTGAGAAGTACTACTGTGCAAAAGGATCCACTGCAATCAGATGATGACACC
AATTGTACAGATGAAGATGATAACTGTGCTCAATGGGCTGCTACTGGAGAGTGTGAAAGA
AATGCTGTTTTTATGGTTGGTTCTCCTGATTATTATGGTACATGTAGGAAAAGTTGTAAC
GCATGCTAA

Peptide Sequence

PEP ID

XP_016471451.1
PEP Infomation

PREDICTED: probable prolyl 4-hydroxylase 12 isoform X2 [Nicotiana tabacum]
Sequence

MASFLWVFIFLALGINSQLLFAQNRKELRGKEVNGDDIVKLGHSNRFDPSQVVQLSWRPR
VFLYRDFLSAEETDHLISLVHGKRNSSTSDNASLDAEKFPTMGIPLDAEDPTSSRIEERI
SAWTFLPKGNSRPLHVQRSGRENLKGNYGYFDGNSALKSKEPLMATVILYLSNVTQGGQI
LFPESKNKIFSDCMKSSDTLKPTKGNAILFFNAHLDASPDRRSSHARCPVIEGEMWYAIK
FFYLRSTTVQKDPLQSDDDTNCTDEDDNCAQWAATGECERNAVFMVGSPDYYGTCRKSCN
AC

Transcript Sequence

Gene sequence data has not been registered.